PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s664571g001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 189aa    MW: 21275.6 Da    PI: 8.4792
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s664571g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.1e-13250455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       +h ++Er+RR+++N+ +  Lr+l P+    + k+ + a+i   A+e+Ik+Lq
  PDK_30s664571g001  2 SHIAVERNRRRQMNEHLKVLRSLTPNF---YIKRGDQASIIGGAIEFIKELQ 50
                       89************************9...9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.13E-13154No hitNo description
SuperFamilySSF474597.59E-17173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.199149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.6E-10250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-13261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.7E-12455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MSHIAVERNR RRQMNEHLKV LRSLTPNFYI KRGDQASIIG GAIEFIKELQ EVLQSLEAKK  60
RRKSLSPSPT PSPRPLLQFT PSPPLSNPYD SDVVKELGAC CNSPVADVEA KISGSNVLLR  120
TLSKRIPGQV IKIIAVLERL AFEILHLNIS SMEDTVLYSF VIKIGFDCQL SVEELAHEVQ  180
QSFFQDITY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15862KKRRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008793693.11e-137PREDICTED: transcription factor MUTE-like
SwissprotQ9M8K62e-86MUTE_ARATH; Transcription factor MUTE
TrEMBLM0TJE81e-103M0TJE8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P21110_0011e-102(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP111443441
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-78bHLH family protein